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| Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
|---|---|---|---|---|
| 4 | 3 | 6 | 0.972 | test_plus |
| Clone Abstraction | Parameter Bindings |
| Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
|---|---|---|---|
| 1 | 4 | 825 | Bio/Emboss/Applications.py |
| 2 | 4 | 867 | Bio/Emboss/Applications.py |
| 3 | 4 | 883 | Bio/Emboss/Applications.py |
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_Option(["-sequence","sequence"],["input","file"],None,1,"Sequence"),_Option(["-gap","gap"],["input","file"],None,1,"Gap penalty") |
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_Option(["-asequence","asequence"],["input","file"],None,1,"Nucleotide sequences to be aligned."),_Option(["-bsequence","bsequence"],["input","file"],None,1,"Protein sequence alignment") |
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_Option(["-asequence","asequence"],["input","file"],None,1,"First sequence to compare"),_Option(["-bsequence","bsequence"],["input","file"],None,1,"Second sequence to compare") |
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_Option([ [[#variable19be72e0]], [[#variable19be71a0]]],["input","file"],None,1, [[#variable19be7080]]),_Option([ [[#variable19be60c0]], [[#variable77a0b060]]],["input","file"],None,1, [[#variable19be7140]]) |
| CloneAbstraction |
| Parameter Index | Clone Instance | Parameter Name | Value |
|---|---|---|---|
| 1 | 1 | [[#19be72e0]] | "-asequence" |
| 1 | 2 | [[#19be72e0]] | "-sequence" |
| 1 | 3 | [[#19be72e0]] | "-asequence" |
| 2 | 1 | [[#19be71a0]] | "asequence" |
| 2 | 2 | [[#19be71a0]] | "sequence" |
| 2 | 3 | [[#19be71a0]] | "asequence" |
| 3 | 1 | [[#19be7080]] | "First sequence to compare" |
| 3 | 2 | [[#19be7080]] | "Sequence" |
| 3 | 3 | [[#19be7080]] | "Nucleotide sequences to be aligned." |
| 4 | 1 | [[#19be60c0]] | "-bsequence" |
| 4 | 2 | [[#19be60c0]] | "-gap" |
| 4 | 3 | [[#19be60c0]] | "-bsequence" |
| 5 | 1 | [[#77a0b060]] | "bsequence" |
| 5 | 2 | [[#77a0b060]] | "gap" |
| 5 | 3 | [[#77a0b060]] | "bsequence" |
| 6 | 1 | [[#19be7140]] | "Second sequence to compare" |
| 6 | 2 | [[#19be7140]] | "Gap penalty" |
| 6 | 3 | [[#19be7140]] | "Protein sequence alignment" |