CloneSet259


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
6	2	4	0.979	compound_stmt

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	6	1095	Bio/Blast/NCBIStandalone.py
2	6	1102	Bio/Blast/NCBIStandalone.py

Clone Instance
1

Line Count
6

Source Line
1095

Source File

Bio/Blast/NCBIStandalone.py

        if line.find("Positives")!=  -1: 
             x,y =  _re_search("Positives = (\\d+)\\/(\\d+)",line,"""I could not find the positives in line
%s"""                                                             %line) 

             self._hsp.positives = _safe_int(x),_safe_int(y) 
             assert self._hsp.align_length==_safe_int(y)

Clone Instance
2

Line Count
6

Source Line
1102

Source File

Bio/Blast/NCBIStandalone.py

        if line.find("Gaps")!=  -1: 
             x,y =  _re_search("Gaps = (\\d+)\\/(\\d+)",line,"""I could not find the gaps in line
%s"""                                                        %line) 

             self._hsp.gaps = _safe_int(x),_safe_int(y) 
             assert self._hsp.align_length==_safe_int(y)

Clone Abstraction

Parameter Count: 4

Parameter Bindings

if line.find( [[#variable2bdedf40]])!= -1:
  x,y = _re_search( [[#variable1b0caba0]],line, [[#variable2bdedbc0]]%line) 
  self._hsp. [[#variable1b0cac00]]= _safe_int(x),_safe_int(y) 
  assert self._hsp.align_length==_safe_int(y)

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#2bdedf40]]`	"Gaps"
1	2	`[[#2bdedf40]]`	"Positives"
2	1	`[[#1b0caba0]]`	"Gaps = (\\d+)\\/(\\d+)"
2	2	`[[#1b0caba0]]`	"Positives = (\\d+)\\/(\\d+)"
3	1	`[[#2bdedbc0]]`	"""I could not find the gaps in line %s"""
3	2	`[[#2bdedbc0]]`	"""I could not find the positives in line %s"""
4	1	`[[#1b0cac00]]`	gaps
4	2	`[[#1b0cac00]]`	positives