CloneSet320


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
10	2	4	0.968	compound_stmt

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	10	59	Bio/utils.py
2	10	70	Bio/utils.py

Clone Instance
1

Line Count
10

Source Line
59

Source File

Bio/utils.py

def transcribe(seq): 
     "Transcribe a sequence (DEPRECATED)." 
     import warnings 
     warnings.warn("Bio.utils.transcribe() has been deprecated, and we"+" intend to remove it in a future release of Biopython."+" Please use the transcribe method or function in"+" Bio.Seq instead, as described in the Tutorial.",DeprecationWarning) 




     transcriber = default_manager.resolve(seq.alphabet,"transcriber") 
     return transcriber.transcribe(seq)

Clone Instance
2

Line Count
10

Source Line
70

Source File

Bio/utils.py

def back_transcribe(seq): 
     "Back-transcribe a sequence (DEPRECATED)." 
     import warnings 
     warnings.warn("Bio.utils.back_transcribe() has been deprecated, and we"+" intend to remove it in a future release of Biopython."+" Please use the back_transcribe method or function in"+" Bio.Seq instead, as described in the Tutorial.",DeprecationWarning) 




     transcriber = default_manager.resolve(seq.alphabet,"transcriber") 
     return transcriber.back_transcribe(seq)

Clone Abstraction

Parameter Count: 4

Parameter Bindings

def [[#variable7c3590e0]](seq):
   [[#variable7c359060]]
  import warnings 
  warnings.warn( [[#variable7c359000]]+" intend to remove it in a future release of Biopython."+ [[#variable7c358f80]]+" Bio.Seq instead, as described in the Tutorial.",DeprecationWarning) 
  transcriber = default_manager.resolve(seq.alphabet,"transcriber") 
  return transcriber. [[#variable7c3590e0]](seq)

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#7c3590e0]]`	back_transcribe
1	2	`[[#7c3590e0]]`	transcribe
2	1	`[[#7c359060]]`	"Back-transcribe a sequence (DEPRECATED)."
2	2	`[[#7c359060]]`	"Transcribe a sequence (DEPRECATED)."
3	1	`[[#7c359000]]`	"Bio.utils.back_transcribe() has been deprecated, and we"
3	2	`[[#7c359000]]`	"Bio.utils.transcribe() has been deprecated, and we"
4	1	`[[#7c358f80]]`	" Please use the back_transcribe method or function in"
4	2	`[[#7c358f80]]`	" Please use the transcribe method or function in"