CloneSet320


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Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
10240.968compound_stmt
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
11059
Bio/utils.py
21070
Bio/utils.py
Clone Instance
1
Line Count
10
Source Line
59
Source File
Bio/utils.py

def transcribe(seq): 
     "Transcribe a sequence (DEPRECATED)." 
     import warnings 
     warnings.warn("Bio.utils.transcribe() has been deprecated, and we"+" intend to remove it in a future release of Biopython."+" Please use the transcribe method or function in"+" Bio.Seq instead, as described in the Tutorial.",DeprecationWarning) 




     transcriber = default_manager.resolve(seq.alphabet,"transcriber") 
     return transcriber.transcribe(seq) 


Clone Instance
2
Line Count
10
Source Line
70
Source File
Bio/utils.py

def back_transcribe(seq): 
     "Back-transcribe a sequence (DEPRECATED)." 
     import warnings 
     warnings.warn("Bio.utils.back_transcribe() has been deprecated, and we"+" intend to remove it in a future release of Biopython."+" Please use the back_transcribe method or function in"+" Bio.Seq instead, as described in the Tutorial.",DeprecationWarning) 




     transcriber = default_manager.resolve(seq.alphabet,"transcriber") 
     return transcriber.back_transcribe(seq) 


Clone AbstractionParameter Count: 4Parameter Bindings

def [[#variable7c3590e0]](seq):
   [[#variable7c359060]]
  import warnings 
  warnings.warn( [[#variable7c359000]]+" intend to remove it in a future release of Biopython."+ [[#variable7c358f80]]+" Bio.Seq instead, as described in the Tutorial.",DeprecationWarning) 
  transcriber = default_manager.resolve(seq.alphabet,"transcriber") 
  return transcriber. [[#variable7c3590e0]](seq) 
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#7c3590e0]]
back_transcribe 
12[[#7c3590e0]]
transcribe 
21[[#7c359060]]
"Back-transcribe a sequence (DEPRECATED)." 
22[[#7c359060]]
"Transcribe a sequence (DEPRECATED)." 
31[[#7c359000]]
"Bio.utils.back_transcribe() has been deprecated, and we" 
32[[#7c359000]]
"Bio.utils.transcribe() has been deprecated, and we" 
41[[#7c358f80]]
" Please use the back_transcribe method or function in" 
42[[#7c358f80]]
" Please use the transcribe method or function in"