CloneSet334


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
4	2	0	1.000	compound_stmt

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	4	176	Bio/Blast/NCBIStandalone.py
2	4	182	Bio/Blast/NCBIStandalone.py

Clone Instance
1

Line Count
4

Source Line
176

Source File

Bio/Blast/NCBIStandalone.py

        # blastpgp may have a reference for compositional score matrix
        # adjustment (see Bug 2502):
        if attempt_read_and_call(uhandle,consumer.reference,start = "Reference"):
                                                            
            read_and_call_until(uhandle,consumer.reference,blank = 1) 
            read_and_call_while(uhandle,consumer.noevent,blank = 1) 

        # blastpgp has a Reference for composition-based statistics.

Clone Instance
2

Line Count
4

Source Line
182

Source File

Bio/Blast/NCBIStandalone.py

        if attempt_read_and_call(uhandle,consumer.reference,start = "Reference"):
                                                            
            read_and_call_until(uhandle,consumer.reference,blank = 1) 
            read_and_call_while(uhandle,consumer.noevent,blank = 1)

Clone Abstraction

Parameter Count: 0

Parameter Bindings

# blastpgp may have a reference for compositional score matrix
# adjustment (see Bug 2502):
if attempt_read_and_call(uhandle,consumer.reference,start = "Reference"):
  read_and_call_until(uhandle,consumer.reference,blank = 1) 
  read_and_call_while(uhandle,consumer.noevent,blank = 1) 
  # blastpgp has a Reference for composition-based statistics.

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
None