CloneSet178


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
10	2	6	0.960	file_input_element_list[5]

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	10	14	Bio/Encodings/IUPACEncoding.py
2	10	27	Bio/Encodings/IUPACEncoding.py

Clone Instance
1

Line Count
10

Source Line
14

Source File

Bio/Encodings/IUPACEncoding.py

# weight tables
set_prop[IUPAC.IUPACUnambiguousDNA]["weight_table"] =
             IUPACData.unambiguous_dna_weights 
set_prop[IUPAC.IUPACAmbiguousDNA]["weight_table"] =
             IUPACData.avg_ambiguous_dna_weights 
set_prop[IUPAC.IUPACUnambiguousRNA]["weight_table"] =
             IUPACData.unambiguous_rna_weights 
set_prop[IUPAC.IUPACAmbiguousRNA]["weight_table"] =
             IUPACData.avg_ambiguous_rna_weights 
set_prop[IUPAC.IUPACProtein]["weight_table"] =
             IUPACData.protein_weights

Clone Instance
2

Line Count
10

Source Line
27

Source File

Bio/Encodings/IUPACEncoding.py

set_prop[IUPAC.IUPACUnambiguousDNA]["weight_range_table"] =
             IUPACData.unambiguous_dna_weight_ranges 
set_prop[IUPAC.IUPACAmbiguousDNA]["weight_range_table"] =
             IUPACData.ambiguous_dna_weight_ranges 
set_prop[IUPAC.IUPACUnambiguousRNA]["weight_range_table"] =
             IUPACData.unambiguous_rna_weight_ranges 
set_prop[IUPAC.IUPACAmbiguousRNA]["weight_range_table"] =
             IUPACData.ambiguous_rna_weight_ranges 
set_prop[IUPAC.IUPACProtein]["weight_range_table"] =
             IUPACData.protein_weight_ranges

Clone Abstraction

Parameter Count: 6

Parameter Bindings

# weight tables
set_prop[IUPAC.IUPACUnambiguousDNA][ [[#variable61d08600]]] = IUPACData. [[#variable61d084c0]]
set_prop[IUPAC.IUPACAmbiguousDNA][ [[#variable61d08600]]] = IUPACData. [[#variable61d085a0]]
set_prop[IUPAC.IUPACUnambiguousRNA][ [[#variable61d08600]]] = IUPACData. [[#variable61d08520]]
set_prop[IUPAC.IUPACAmbiguousRNA][ [[#variable61d08600]]] = IUPACData. [[#variable61d08420]]
set_prop[IUPAC.IUPACProtein][ [[#variable61d08600]]] = IUPACData. [[#variable61d083e0]]

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#61d08600]]`	"weight_range_table"
1	2	`[[#61d08600]]`	"weight_table"
2	1	`[[#61d084c0]]`	unambiguous_dna_weight_ranges
2	2	`[[#61d084c0]]`	unambiguous_dna_weights
3	1	`[[#61d085a0]]`	ambiguous_dna_weight_ranges
3	2	`[[#61d085a0]]`	avg_ambiguous_dna_weights
4	1	`[[#61d08520]]`	unambiguous_rna_weight_ranges
4	2	`[[#61d08520]]`	unambiguous_rna_weights
5	1	`[[#61d08420]]`	ambiguous_rna_weight_ranges
5	2	`[[#61d08420]]`	avg_ambiguous_rna_weights
6	1	`[[#61d083e0]]`	protein_weight_ranges
6	2	`[[#61d083e0]]`	protein_weights