CloneSet178


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Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
10260.960file_input_element_list[5]
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
11014
Bio/Encodings/IUPACEncoding.py
21027
Bio/Encodings/IUPACEncoding.py
Clone Instance
1
Line Count
10
Source Line
14
Source File
Bio/Encodings/IUPACEncoding.py

# weight tables
set_prop[IUPAC.IUPACUnambiguousDNA]["weight_table"] =
             IUPACData.unambiguous_dna_weights 
set_prop[IUPAC.IUPACAmbiguousDNA]["weight_table"] =
             IUPACData.avg_ambiguous_dna_weights 
set_prop[IUPAC.IUPACUnambiguousRNA]["weight_table"] =
             IUPACData.unambiguous_rna_weights 
set_prop[IUPAC.IUPACAmbiguousRNA]["weight_table"] =
             IUPACData.avg_ambiguous_rna_weights 
set_prop[IUPAC.IUPACProtein]["weight_table"] =
             IUPACData.protein_weights 


Clone Instance
2
Line Count
10
Source Line
27
Source File
Bio/Encodings/IUPACEncoding.py

set_prop[IUPAC.IUPACUnambiguousDNA]["weight_range_table"] =
             IUPACData.unambiguous_dna_weight_ranges 
set_prop[IUPAC.IUPACAmbiguousDNA]["weight_range_table"] =
             IUPACData.ambiguous_dna_weight_ranges 
set_prop[IUPAC.IUPACUnambiguousRNA]["weight_range_table"] =
             IUPACData.unambiguous_rna_weight_ranges 
set_prop[IUPAC.IUPACAmbiguousRNA]["weight_range_table"] =
             IUPACData.ambiguous_rna_weight_ranges 
set_prop[IUPAC.IUPACProtein]["weight_range_table"] =
             IUPACData.protein_weight_ranges 


Clone AbstractionParameter Count: 6Parameter Bindings

# weight tables
set_prop[IUPAC.IUPACUnambiguousDNA][ [[#variable61d08600]]] = IUPACData. [[#variable61d084c0]]
set_prop[IUPAC.IUPACAmbiguousDNA][ [[#variable61d08600]]] = IUPACData. [[#variable61d085a0]]
set_prop[IUPAC.IUPACUnambiguousRNA][ [[#variable61d08600]]] = IUPACData. [[#variable61d08520]]
set_prop[IUPAC.IUPACAmbiguousRNA][ [[#variable61d08600]]] = IUPACData. [[#variable61d08420]]
set_prop[IUPAC.IUPACProtein][ [[#variable61d08600]]] = IUPACData. [[#variable61d083e0]]
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#61d08600]]
"weight_range_table" 
12[[#61d08600]]
"weight_table" 
21[[#61d084c0]]
unambiguous_dna_weight_ranges 
22[[#61d084c0]]
unambiguous_dna_weights 
31[[#61d085a0]]
ambiguous_dna_weight_ranges 
32[[#61d085a0]]
avg_ambiguous_dna_weights 
41[[#61d08520]]
unambiguous_rna_weight_ranges 
42[[#61d08520]]
unambiguous_rna_weights 
51[[#61d08420]]
ambiguous_rna_weight_ranges 
52[[#61d08420]]
avg_ambiguous_rna_weights 
61[[#61d083e0]]
protein_weight_ranges 
62[[#61d083e0]]
protein_weights