CloneSet436


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
4	2	3	0.975	stmt_list[4]

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	4	178	Bio/SeqIO/FastaIO.py
2	4	189	Bio/SeqIO/FastaIO.py

Clone Instance
1

Line Count
4

Source Line
178

Source File

Bio/SeqIO/FastaIO.py

        print "--------" 
        print "FastaIterator (single sequence)" 
        iterator = FastaIterator(open(fna_filename,"r"),alphabet = generic_nucleotide,title2ids = genbank_name_function) 
        count = 0

Clone Instance
2

Line Count
4

Source Line
189

Source File

Bio/SeqIO/FastaIO.py

        print "--------" 
        print "FastaIterator (multiple sequences)" 
        iterator = FastaIterator(open(faa_filename,"r"),alphabet = generic_protein,title2ids = genbank_name_function) 
        count = 0

Clone Abstraction

Parameter Count: 3

Parameter Bindings

print "--------" 
print [[#variable78a215a0]]
iterator = FastaIterator(open( [[#variable5e2c7820]],"r"),alphabet = [[#variable5e2c7800]],title2ids = genbank_name_function) 
count = 0

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#78a215a0]]`	"FastaIterator (single sequence)"
1	2	`[[#78a215a0]]`	"FastaIterator (multiple sequences)"
2	1	`[[#5e2c7820]]`	fna_filename
2	2	`[[#5e2c7820]]`	faa_filename
3	1	`[[#5e2c7800]]`	generic_nucleotide
3	2	`[[#5e2c7800]]`	generic_protein